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Intron Name: Anas_platyrhynchos_platyrhynchos_8_8588267_8588353_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

8588267 - 8588353

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGGGGC

5'SS Class:

strong_major

3'SS Sequence:

CACACCCCGCCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TCCTAAC

U12 Branch Point Sequence:

CTTCCCACACCC

Flanking Amino Acid:

ISPLISYGGEGLEKYVKDRE

Intron Amino Acid Position:

479

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.9

73.9

36.8

Major BPS

0.55

71.8

31.4

Major PPT

56.1

0.14

46.9

36.2

Minor 5ss

29.6

-2.3

3.5

41.1

45.6

Minor BPS

45.6

-0.3

2.1

61.35

43.7

Associated Gene:

Gene:

UAP1

Ensembl Gene ID:

ENSAPLG00000014521

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015169

8588174 - 8592938

4765