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Intron Name: Anas_platyrhynchos_platyrhynchos_8_8588421_8590131_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8588421 - 8590131

Intron Length:

1711

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTGAGCCCC

5'SS Class:

major

3'SS Sequence:

TTTCTCTCCGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CGCTGAT

U12 Branch Point Sequence:

AGGCGCTGATGC

Flanking Amino Acid:

ENGTRIPAIPRLKDASDLPI

Intron Amino Acid Position:

456

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.5

0.56

57.1

42.2

Major BPS

63.8

0.34

1.2

54.7

43.1

Major PPT

85.2

0.79

0.7

24.1

Minor 5ss

34.2

-1.8

44.2

43.2

Minor BPS

36.3

-1

39.79

39.1

Associated Gene:

Gene:

UAP1

Ensembl Gene ID:

ENSAPLG00000014521

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015169

8588174 - 8592938

4765