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Intron Name: Anas_platyrhynchos_platyrhynchos_8_8601104_8601495_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8601104 - 8601495

Intron Length:

392

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGAGAG

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCTTCCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAATTAC

U12 Branch Point Sequence:

TCAGCCCTAATT

Flanking Amino Acid:

KHTVQSQEWKANSSAIIDRI

Intron Amino Acid Position:

262

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.6

0.84

0.8

71.2

34.6

Major BPS

0.42

1.1

38.5

Major PPT

90.9

0.92

0.6

84.7

30.2

Minor 5ss

24.3

-3

3.1

28.4

43.8

Minor BPS

57.6

0.32

1.8

73.27

43.8

Associated Gene:

Gene:

UHMK1

Ensembl Gene ID:

ENSAPLG00000014799

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015438

8596042 - 8605275

9234