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Intron Name: Anas_platyrhynchos_platyrhynchos_8_8609523_8614093_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

8609523 - 8614093

Intron Length:

4571

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GGA|GCAGGAGGG

5'SS Class:

weak_major

3'SS Sequence:

AGGGCAGCAGCAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGCCCAG

U12 Branch Point Sequence:

AGGGCAGCAGCA

Flanking Amino Acid:

LKVLLEKESQDLGEAVRMSS

Intron Amino Acid Position:

210

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

57.7

0.18

1.3

52.2

41.6

Major BPS

43.3

-0.4

1.6

52.1

45.2

Major PPT

48.4

-0

1.1

37.5

39.3

Minor 5ss

19.4

-3.5

4.1

24.7

38.3

Minor BPS

33.1

-1.2

2.2

39.96

39.6

Associated Gene:

Gene:

SPATA46

Ensembl Gene ID:

ENSAPLG00000025054

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035431

8605540 - 8614163

8624