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Intron Name: Anas_platyrhynchos_platyrhynchos_8_8613301_8613967_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8613301 - 8613967

Intron Length:

667

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTCGTCCC

5'SS Class:

major

3'SS Sequence:

CCCTGTCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCGTCAC

U12 Branch Point Sequence:

ACTGGTGTGACG

Flanking Amino Acid:

QQQTQVAVAQVHLLKDQLAA

Intron Amino Acid Position:

277

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.8

0.51

1.2

42.7

Major BPS

62.4

0.31

1.2

65.3

41.6

Major PPT

70.9

0.47

0.8

64.6

30.9

Minor 5ss

30.8

-2.2

2.8

37.7

39.6

Minor BPS

39.1

-1

2.3

43.38

43.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000014905

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015540

8612440 - 8627731

15292