Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_8_8614539_8615252_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8614539 - 8615252

Intron Length:

714

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACCGTGC

5'SS Class:

major

3'SS Sequence:

TGCCCTCCCGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTCCCAG

U12 Branch Point Sequence:

GGGGTCCCAGCT

Flanking Amino Acid:

ERNGDDLDVPACRLTAVERA

Intron Amino Acid Position:

170

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

65.5

0.36

1.3

55.9

44.3

Major BPS

42.3

-0.4

1.7

52.1

45.2

Major PPT

71.5

0.48

0.8

65.3

30.5

Minor 5ss

41.6

-0.9

3.4

59.3

45.4

Minor BPS

38.4

-0.8

1.9

50.18

43.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000014905

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015540

8612440 - 8627731

15292