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Intron Name: Anas_platyrhynchos_platyrhynchos_8_8790706_8793625_R


Intron Information:

Intron Rank:
1

Intron Class:
major-like

Intron Phase:
0

Intron Coordinates:
8790706 - 8793625

Intron Length:
2920

Sequence Information:

Terminal Dinucleotides:
GC-AG

5'SS Sequence:
ATG|GCGTGGACG

5'SS Class:
major

3'SS Sequence:
CCCCGCAGCCGAG|A

3'SS Class:
degenerate_major

U2 Branch Point Sequence:
CGCTCAC

U12 Branch Point Sequence:
AGTCGCTCACCC

Flanking Amino Acid:
MKVSSLGKDWH

Intron Amino Acid Position:
2

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
65
0.36
1.2
58.3
40.9

Major BPS
57.5
0.19
1.1
60.7
37.6

Major PPT
43.6
-0.3
1.6
38
33.4

Minor 5ss
23
-3.1
3.7
27.9
37.6

Minor BPS
43.7
-0.4
2.1
55.51
42.3

Associated Gene:

Gene:
CRIP2

Ensembl Gene ID:

Chromosome:
8

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

8787687 - 8793628
5942