Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_8_8790711_8792571_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8790711 - 8792571

Intron Length:

1861

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTGAATCTC

5'SS Class:

major

3'SS Sequence:

TGTCTCCCCGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGCTCAC

U12 Branch Point Sequence:

AGTCGCTCACCC

Flanking Amino Acid:

RCPRCFRAEKVSSLGKD

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.4

0.53

65.5

40.5

Major BPS

57.5

0.19

1.1

60.7

37.6

Major PPT

0.58

0.8

30.9

Minor 5ss

32.2

-2

3.1

35.7

41.1

Minor BPS

43.7

-0.4

2.1

55.51

42.3

Associated Gene:

Gene:

CRIP2

Ensembl Gene ID:

ENSAPLG00000015110

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025005

8787687 - 8792593

4907