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Intron Name: Anas_platyrhynchos_platyrhynchos_8_8805840_8809292_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8805840 - 8809292

Intron Length:

3453

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGAAGG

5'SS Class:

strong_major

3'SS Sequence:

CTTCTGTCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTGTAAC

U12 Branch Point Sequence:

GTCTCTGTAACA

Flanking Amino Acid:

DVFYMATEETRKIRKLLSSS

Intron Amino Acid Position:

649

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.9

0.94

0.8

75.5

40.6

Major BPS

62.2

0.3

1.2

38.7

Major PPT

82.4

0.73

0.8

76.6

Minor 5ss

32.9

-2

2.9

40.4

45.3

Minor BPS

59.5

0.29

71.5

41.1

Associated Gene:

Gene:

MTA1

Ensembl Gene ID:

ENSAPLG00000015316

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023104

8805641 - 8885298

79658

ENSAPLT00000016037

8805641 - 8885298

79658