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Intron Name: Anas_platyrhynchos_platyrhynchos_8_8829542_8836391_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8829542 - 8836391

Intron Length:

6850

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTA|GTAAGTATC

5'SS Class:

strong_major

3'SS Sequence:

TTTGTGTTTTAAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GATTAAT

U12 Branch Point Sequence:

TTGTGTTTTAAG

Flanking Amino Acid:

SKLKQVYIPNYNKPNPNQIN

Intron Amino Acid Position:

342

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.4

0.72

0.9

80.8

31.6

Major BPS

0.6

1.2

75.9

36.3

Major PPT

75.5

0.57

1.1

79.2

38.4

Minor 5ss

42.1

-0.9

2.8

56.5

35.6

Minor BPS

45.7

-0.4

2.2

55.87

45.6

Associated Gene:

Gene:

MTA1

Ensembl Gene ID:

ENSAPLG00000015316

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023104

8805641 - 8885298

79658

ENSAPLT00000016037

8805641 - 8885298

79658