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Intron Name: Anas_platyrhynchos_platyrhynchos_8_8845944_8847362_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

8845944 - 8847362

Intron Length:

1419

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGATTT

5'SS Class:

strong_major

3'SS Sequence:

TACGACCATGTAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TCCTAAT

U12 Branch Point Sequence:

TTCTCTTTTACG

Flanking Amino Acid:

AAAASRDITLFHAMDTLHKN

Intron Amino Acid Position:

235

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.4

0.86

0.9

83.3

29.1

Major BPS

81.9

0.79

0.9

80.1

Major PPT

59.1

0.21

51.9

37.7

Minor 5ss

-0.6

3.2

62.3

43.4

Minor BPS

66.3

0.37

1.7

71.14

42.2

Associated Gene:

Gene:

MTA1

Ensembl Gene ID:

ENSAPLG00000015316

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016037

8805641 - 8885298

79658

ENSAPLT00000023104

8805641 - 8885298

79658