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Intron Name: Anas_platyrhynchos_platyrhynchos_8_8868802_8885270_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8868802 - 8885270

Intron Length:

16469

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGCGGC

5'SS Class:

strong_major

3'SS Sequence:

TTTCTTTTGTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

CTTATTTTAAAG

Flanking Amino Acid:

MAANMYRVGDYVYFENSSS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.2

0.78

0.9

66.6

39.6

Major BPS

90.4

0.7

90.2

19.3

Major PPT

86.6

0.82

0.9

88.2

29.1

Minor 5ss

31.2

-2.1

3.3

41.1

45.6

Minor BPS

56.9

0.08

1.5

60.51

41.6

Associated Gene:

Gene:

MTA1

Ensembl Gene ID:

ENSAPLG00000015316

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023104

8805641 - 8885298

79658

ENSAPLT00000016037

8805641 - 8885298

79658