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Intron Name: Anas_platyrhynchos_platyrhynchos_8_8902431_8908620_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8902431 - 8908620

Intron Length:

6190

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGTTAC

5'SS Class:

strong_major

3'SS Sequence:

TCTTTGCCTCTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTAAC

U12 Branch Point Sequence:

CTACTAACAACT

Flanking Amino Acid:

AEAMLTYKQKSPDEESSQKF

Intron Amino Acid Position:

661

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.5

0.91

0.8

80.1

28.4

Major BPS

76.8

0.67

0.9

75.9

Major PPT

78.2

0.63

0.8

70.2

36.5

Minor 5ss

46.6

-0.3

2.5

60.6

44.5

Minor BPS

42.7

-0.4

1.9

60.84

42.1

Associated Gene:

Gene:

PACS2

Ensembl Gene ID:

ENSAPLG00000015577

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042827

8892676 - 8936872

44197

ENSAPLT00000022068

8892676 - 8936872

44197

ENSAPLT00000016298

8892676 - 8956940

64265