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Intron Name: Anas_platyrhynchos_platyrhynchos_8_8908730_8910875_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8908730 - 8910875

Intron Length:

2146

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGACCG

5'SS Class:

strong_major

3'SS Sequence:

TCTTCTGTTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTGAT

U12 Branch Point Sequence:

ACTTTGTTGATT

Flanking Amino Acid:

LFNKLEAQTTVPEAPDVVSR

Intron Amino Acid Position:

625

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

61.7

42.8

Major BPS

81.2

0.78

1.1

71.4

45.1

Major PPT

85.1

0.79

0.8

80.1

31.8

Minor 5ss

32.4

-2

37.9

40.5

Minor BPS

52.5

0.16

2.1

71.97

39.8

Associated Gene:

Gene:

PACS2

Ensembl Gene ID:

ENSAPLG00000015577

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042827

8892676 - 8936872

44197

ENSAPLT00000016298

8892676 - 8956940

64265