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Intron Name: Anas_platyrhynchos_platyrhynchos_8_8908730_8914363_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8908730 - 8914363

Intron Length:

5634

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAATAAG

5'SS Class:

strong_major

3'SS Sequence:

TCTTCTGTTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTGAT

U12 Branch Point Sequence:

ACTTTGTTGATT

Flanking Amino Acid:

GYMRFLIIPLVPEAPDVVSR

Intron Amino Acid Position:

629

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.9

0.87

0.9

80.3

34.3

Major BPS

81.2

0.78

1.1

71.4

45.1

Major PPT

85.1

0.79

0.8

80.1

31.8

Minor 5ss

34.4

-1.8

2.8

41.5

45.1

Minor BPS

52.5

0.16

2.1

71.97

39.8

Associated Gene:

Gene:

PACS2

Ensembl Gene ID:

ENSAPLG00000015577

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022068

8892676 - 8936872

44197