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Intron Name: Anas_platyrhynchos_platyrhynchos_8_8910987_8914363_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8910987 - 8914363

Intron Length:

3377

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAATAAG

5'SS Class:

strong_major

3'SS Sequence:

CTTTCTTTCTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTGTCAT

U12 Branch Point Sequence:

TTTTCCTTTCTT

Flanking Amino Acid:

GYMRFLIIPLGSHPVAKYLG

Intron Amino Acid Position:

588

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.9

0.87

0.9

80.3

34.3

Major BPS

72.5

0.56

1.2

39.9

Major PPT

84.5

0.78

0.6

84.4

23.4

Minor 5ss

34.4

-1.8

2.8

41.5

45.1

Minor BPS

48.5

-0

3.6

87.87

37.8

Associated Gene:

Gene:

PACS2

Ensembl Gene ID:

ENSAPLG00000015577

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016298

8892676 - 8956940

64265

ENSAPLT00000042827

8892676 - 8936872

44197