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Intron Name: Anas_platyrhynchos_platyrhynchos_8_8916930_8917659_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8916930 - 8917659

Intron Length:

730

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGTGAAAA

5'SS Class:

strong_major

3'SS Sequence:

TCGTCATTTCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCGTCAT

U12 Branch Point Sequence:

TCTTCTGTATCG

Flanking Amino Acid:

RSPDTRHHLQIPRKTVYDQL

Intron Amino Acid Position:

466

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.5

0.72

0.9

74.7

29.7

Major BPS

72.2

0.55

1.2

73.6

41.8

Major PPT

78.5

0.64

0.9

69.6

40.6

Minor 5ss

33.4

-1.9

2.8

39.2

46.2

Minor BPS

48.9

-0.2

2.3

62.39

Associated Gene:

Gene:

PACS2

Ensembl Gene ID:

ENSAPLG00000015577

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042827

8892676 - 8936872

44197

ENSAPLT00000022068

8892676 - 8936872

44197

ENSAPLT00000016298

8892676 - 8956940

64265