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Intron Name: Anas_platyrhynchos_platyrhynchos_8_8917796_8918468_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8917796 - 8918468

Intron Length:

673

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGAGCAG

5'SS Class:

major

3'SS Sequence:

CATTTCTCTCTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTAGAA

U12 Branch Point Sequence:

AGGTCTAGAATG

Flanking Amino Acid:

KTESLIIPSTSRSEGKQTGR

Intron Amino Acid Position:

420

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.42

1.1

53.8

44.9

Major BPS

57.4

0.18

1.1

54.9

40.8

Major PPT

78.2

0.63

0.8

70.3

Minor 5ss

28.1

-2.5

3.5

37.1

47.5

Minor BPS

45.9

-0.4

1.7

48.35

39.2

Associated Gene:

Gene:

PACS2

Ensembl Gene ID:

ENSAPLG00000015577

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042827

8892676 - 8936872

44197

ENSAPLT00000022068

8892676 - 8936872

44197

ENSAPLT00000016298

8892676 - 8956940

64265