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Intron Name: Anas_platyrhynchos_platyrhynchos_8_8922420_8923619_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8922420 - 8923619

Intron Length:

1200

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGTAAT

5'SS Class:

strong_major

3'SS Sequence:

CTCCTGCACATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CAGCCAT

U12 Branch Point Sequence:

TTCTCCTGCACA

Flanking Amino Acid:

LLKRFKVSDEVLDSEQDPAE

Intron Amino Acid Position:

271

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

98.8

1.15

0.6

96.1

12.1

Major BPS

46.8

-0.2

1.4

53.8

41.9

Major PPT

62.7

0.29

0.9

57.1

32.5

Minor 5ss

37.4

-1.4

2.8

50.6

45.9

Minor BPS

61.9

0.37

76.11

41.2

Associated Gene:

Gene:

PACS2

Ensembl Gene ID:

ENSAPLG00000015577

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042827

8892676 - 8936872

44197

ENSAPLT00000022068

8892676 - 8936872

44197

ENSAPLT00000016298

8892676 - 8956940

64265