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Intron Name: Anas_platyrhynchos_platyrhynchos_8_8923680_8925616_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8923680 - 8925616

Intron Length:

1937

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTCGGTGGA

5'SS Class:

major

3'SS Sequence:

CTTTGACTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAAAAAT

U12 Branch Point Sequence:

TGATGCTTAACT

Flanking Amino Acid:

SIVRTTSITRQQNFKQKVVA

Intron Amino Acid Position:

251

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

60.3

0.24

1.4

54.2

45.2

Major BPS

62.8

0.32

1.1

67.9

34.4

Major PPT

80.7

0.69

0.9

73.8

35.8

Minor 5ss

25.6

-2.8

3.1

23.1

37.2

Minor BPS

72.4

0.78

1.8

85.91

39.8

Associated Gene:

Gene:

PACS2

Ensembl Gene ID:

ENSAPLG00000015577

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042827

8892676 - 8936872

44197

ENSAPLT00000022068

8892676 - 8936872

44197

ENSAPLT00000016298

8892676 - 8956940

64265