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Intron Name: Anas_platyrhynchos_platyrhynchos_8_8925698_8926467_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8925698 - 8926467

Intron Length:

770

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACTGTTT

5'SS Class:

major

3'SS Sequence:

TCTTTCTGTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAACAAA

U12 Branch Point Sequence:

ACGAAGGTAACA

Flanking Amino Acid:

EASDDAVQGQDLDDDEYELG

Intron Amino Acid Position:

224

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.9

0.54

1.1

72.5

39.4

Major BPS

49.3

-0

1.3

57.4

35.7

Major PPT

85.2

0.79

0.8

84.4

30.5

Minor 5ss

41.7

-0.9

3.6

64.7

46.6

Minor BPS

37.7

-0.9

2.5

46.97

42.8

Associated Gene:

Gene:

PACS2

Ensembl Gene ID:

ENSAPLG00000015577

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016298

8892676 - 8956940

64265

ENSAPLT00000042827

8892676 - 8936872

44197

ENSAPLT00000022068

8892676 - 8936872

44197