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Intron Name: Anas_platyrhynchos_platyrhynchos_8_8936622_8956812_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8936622 - 8956812

Intron Length:

20191

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACGGCT

5'SS Class:

major

3'SS Sequence:

TTCCTGTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTATAAC

U12 Branch Point Sequence:

ATGATTATAACC

Flanking Amino Acid:

IDGSSPSCVPRLCSLTLKKL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.6

0.63

1.2

70.5

38.9

Major BPS

77.9

0.69

78.3

31.3

Major PPT

0.79

0.8

79.8

32.1

Minor 5ss

37.4

-1.4

3.6

56.7

47.6

Minor BPS

0.01

1.6

61.86

37.4

Associated Gene:

Gene:

PACS2

Ensembl Gene ID:

ENSAPLG00000015577

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016298

8892676 - 8956940

64265