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Intron Name: Anas_platyrhynchos_platyrhynchos_8_9013699_9014840_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9013699 - 9014840

Intron Length:

1142

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGTTCC

5'SS Class:

strong_major

3'SS Sequence:

ATCTTTCTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CACTTAT

U12 Branch Point Sequence:

ACGCACTTATCT

Flanking Amino Acid:

CTEDVDECAMANSNPCEHAG

Intron Amino Acid Position:

373

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.2

0.85

0.9

75.8

Major BPS

71.3

0.53

61.3

Major PPT

86.2

0.81

0.7

81.1

30.2

Minor 5ss

-1

2.7

45.9

42.3

Minor BPS

49.4

0.03

1.8

64.87

45.1

Associated Gene:

Gene:

NOTCH2

Ensembl Gene ID:

ENSAPLG00000015861

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030944

8990224 - 9025789

35566