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Intron Name: Anas_platyrhynchos_platyrhynchos_8_9015030_9016153_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

9015030 - 9016153

Intron Length:

1124

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGGGA

5'SS Class:

strong_major

3'SS Sequence:

CCTTAAAAAACAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTAAAAA

U12 Branch Point Sequence:

TTTTCCTTAAAA

Flanking Amino Acid:

IGGFTCLCMPGFKGVHCEED

Intron Amino Acid Position:

424

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

0.9

69.2

37.4

Major BPS

61.4

0.28

1.1

67.9

34.4

Major PPT

58.6

0.19

1.1

52.4

39.5

Minor 5ss

23.1

-3.1

3.2

43.5

Minor BPS

1.19

1.1

93.09

25.3

Associated Gene:

Gene:

NOTCH2

Ensembl Gene ID:

ENSAPLG00000015861

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016640

8988171 - 9054638

66468

ENSAPLT00000030944

8990224 - 9025789

35566