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Intron Name: Anas_platyrhynchos_platyrhynchos_8_9023329_9025120_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9023329 - 9025120

Intron Length:

1792

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGTTCT

5'SS Class:

strong_major

3'SS Sequence:

TTGCGTTTTAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCAA

U12 Branch Point Sequence:

ATGTTCTCAAAT

Flanking Amino Acid:

VHGNCTHIVSGYKCVCDPGW

Intron Amino Acid Position:

685

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.6

0.89

0.9

81.4

33.4

Major BPS

85.7

0.89

0.8

85.9

22.5

Major PPT

70.4

0.46

1.1

70.4

39.2

Minor 5ss

42.4

-0.8

2.8

51.5

44.9

Minor BPS

60.1

0.4

1.6

75.75

40.7

Associated Gene:

Gene:

NOTCH2

Ensembl Gene ID:

ENSAPLG00000015861

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030944

8990224 - 9025789

35566

ENSAPLT00000016640

8988171 - 9054638

66468