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Intron Name: Anas_platyrhynchos_platyrhynchos_8_9026623_9026727_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9026623 - 9026727

Intron Length:

105

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATGTGG

5'SS Class:

major

3'SS Sequence:

CTCCGTGTTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTCTTAC

U12 Branch Point Sequence:

GAGGTCTTACTT

Flanking Amino Acid:

YTCQCAPGWEGERCTVDIDE

Intron Amino Acid Position:

803

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.5

0.65

63.2

43.6

Major BPS

63.8

0.34

1.2

57.4

41.4

Major PPT

75.4

0.57

0.9

71.8

38.1

Minor 5ss

36.2

-1.6

3.2

47.4

Minor BPS

48.8

-0

1.7

60.78

43.5

Associated Gene:

Gene:

NOTCH2

Ensembl Gene ID:

ENSAPLG00000015861

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024024

8987266 - 9054638

67373

ENSAPLT00000016640

8988171 - 9054638

66468