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Intron Name: Anas_platyrhynchos_platyrhynchos_8_9026881_9029559_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9026881 - 9029559

Intron Length:

2679

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTGAGTATC

5'SS Class:

strong_major

3'SS Sequence:

GCTTCTGTTTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTGAT

U12 Branch Point Sequence:

TGATGCTTAATG

Flanking Amino Acid:

CDSNIDDCLSNPCQNGASCV

Intron Amino Acid Position:

854

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.8

0.9

84.1

26.4

Major BPS

0.85

0.9

39.9

Major PPT

75.5

0.57

0.9

37.3

Minor 5ss

36.6

-1.5

2.9

46.1

36.1

Minor BPS

61.5

0.22

1.9

64.99

Associated Gene:

Gene:

NOTCH2

Ensembl Gene ID:

ENSAPLG00000015861

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024024

8987266 - 9054638

67373

ENSAPLT00000016640

8988171 - 9054638

66468