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Intron Name: Anas_platyrhynchos_platyrhynchos_8_903357_903545_R


Intron Information:

Intron Rank:
1

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
903357 - 903545

Intron Length:
189

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTAGGGGCT

5'SS Class:
strong_major

3'SS Sequence:
GCCTTCCCCGCAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CGCTGAG

U12 Branch Point Sequence:
CCGCGCTGAGCA

Flanking Amino Acid:
LETVLAQICADSKIPEGAGL

Intron Amino Acid Position:
39

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
80.3
0.71
1
73.2
34.8

Major BPS
46
-0.2
1.6
40.4
42.3

Major PPT
71.8
0.49
0.8
65.3
30.5

Minor 5ss
30.5
-2.2
3.8
47.1
48.5

Minor BPS
41
-0.6
2
45.23
43.7

Associated Gene:

Gene:
GFI1

Ensembl Gene ID:

Chromosome:
8

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

893863 - 903660
9798