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Intron Name: Anas_platyrhynchos_platyrhynchos_8_9035288_9036266_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9035288 - 9036266

Intron Length:

979

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTAAATAAG

5'SS Class:

major

3'SS Sequence:

AACTTCATTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTTAA

U12 Branch Point Sequence:

CTTTATTTAACT

Flanking Amino Acid:

VSCQVAASQRGVTIDQLCQH

Intron Amino Acid Position:

1049

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.3

0.64

71.2

40.6

Major BPS

79.5

0.73

0.9

36.9

Major PPT

0.56

0.9

70.9

38.8

Minor 5ss

-1.8

2.8

33.5

41.9

Minor BPS

75.8

0.89

1.4

88.66

36.3

Associated Gene:

Gene:

NOTCH2

Ensembl Gene ID:

ENSAPLG00000015861

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024024

8987266 - 9054638

67373

ENSAPLT00000016640

8988171 - 9054638

66468