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Intron Name: Anas_platyrhynchos_platyrhynchos_8_9040012_9042095_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9040012 - 9042095

Intron Length:

2084

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGTATT

5'SS Class:

strong_major

3'SS Sequence:

GTCTACACCTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTACAC

U12 Branch Point Sequence:

GTGTCTACACCT

Flanking Amino Acid:

YTCICRSAFTGRHCESVIDV

Intron Amino Acid Position:

1237

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.8

0.89

0.8

88.7

25.1

Major BPS

60.3

0.26

1.1

68.9

36.5

Major PPT

67.4

0.39

0.9

Minor 5ss

36.4

-1.5

48.3

41.8

Minor BPS

45.5

-0.2

65.77

44.7

Associated Gene:

Gene:

NOTCH2

Ensembl Gene ID:

ENSAPLG00000015861

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024024

8987266 - 9054638

67373

ENSAPLT00000016640

8988171 - 9054638

66468