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Intron Name: Anas_platyrhynchos_platyrhynchos_8_9042209_9042758_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9042209 - 9042758

Intron Length:

550

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTAAGCACC

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTCCCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAG

U12 Branch Point Sequence:

TTTTTTTTCCCT

Flanking Amino Acid:

PDGFICQCPPGYSGAKCEFS

Intron Amino Acid Position:

1275

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.6

0.72

70.1

40.6

Major BPS

72.4

0.56

1.5

71.4

45.1

Major PPT

86.6

0.82

0.6

81.5

30.5

Minor 5ss

41.1

-1

2.8

54.5

42.5

Minor BPS

45.4

-0.2

3.6

82.56

39.6

Associated Gene:

Gene:

NOTCH2

Ensembl Gene ID:

ENSAPLG00000015861

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024024

8987266 - 9054638

67373

ENSAPLT00000016640

8988171 - 9054638

66468