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Intron Name: Anas_platyrhynchos_platyrhynchos_8_9044811_9045552_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9044811 - 9045552

Intron Length:

742

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTAAT

5'SS Class:

strong_major

3'SS Sequence:

CTGGAATTTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTAAT

U12 Branch Point Sequence:

TGTACTTTAACT

Flanking Amino Acid:

MLPYPFVSVQSEPLLPPKTQ

Intron Amino Acid Position:

1592

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.6

0.91

0.8

89.8

22.2

Major BPS

79.3

0.73

1.1

77.9

34.9

Major PPT

66.8

0.38

62.6

43.1

Minor 5ss

39.1

-1.2

2.8

51.7

39.1

Minor BPS

80.1

1.02

1.1

89.7

34.1

Associated Gene:

Gene:

NOTCH2

Ensembl Gene ID:

ENSAPLG00000015861

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024024

8987266 - 9054638

67373

ENSAPLT00000016640

8988171 - 9054638

66468