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Intron Name: Anas_platyrhynchos_platyrhynchos_8_9045764_9046608_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9045764 - 9046608

Intron Length:

845

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGTTGG

5'SS Class:

strong_major

3'SS Sequence:

CCTTGTTTCTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAGTAAT

U12 Branch Point Sequence:

TGTAAAGTAATG

Flanking Amino Acid:

EPVGEDAVGLKNLSVQIPEG

Intron Amino Acid Position:

1662

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.8

0.8

0.9

72.5

39.9

Major BPS

67.8

0.44

1.1

67.7

36.5

Major PPT

77.5

0.62

0.8

76.2

32.4

Minor 5ss

41.3

-1

2.8

49.6

Minor BPS

41.5

-0.7

2.3

51.3

42.7

Associated Gene:

Gene:

NOTCH2

Ensembl Gene ID:

ENSAPLG00000015861

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024024

8987266 - 9054638

67373

ENSAPLT00000016640

8988171 - 9054638

66468