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Intron Name: Anas_platyrhynchos_platyrhynchos_8_9046706_9047065_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9046706 - 9047065

Intron Length:

360

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTTGT

5'SS Class:

strong_major

3'SS Sequence:

TTCCTCTGCTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTGAA

U12 Branch Point Sequence:

AACTGCTTATTT

Flanking Amino Acid:

DGGPQPKKAKAEDQALLPEA

Intron Amino Acid Position:

1695

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

96.5

1.1

0.7

87.9

29.3

Major BPS

74.8

0.62

39.8

Major PPT

76.9

0.61

0.9

76.2

32.3

Minor 5ss

41.9

-0.9

2.9

58.7

45.8

Minor BPS

49.7

0.06

67.1

44.1

Associated Gene:

Gene:

NOTCH2

Ensembl Gene ID:

ENSAPLG00000015861

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024024

8987266 - 9054638

67373

ENSAPLT00000016640

8988171 - 9054638

66468