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Intron Name: Anas_platyrhynchos_platyrhynchos_8_9047235_9051009_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9047235 - 9051009

Intron Length:

3775

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCAGTACT

5'SS Class:

strong_major

3'SS Sequence:

CTTGTGTCTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATGTGAT

U12 Branch Point Sequence:

GTTAGGTTAATG

Flanking Amino Acid:

DVLDVNVRGPDGCTPLMLAS

Intron Amino Acid Position:

1751

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.1

0.78

1.2

84.4

33.5

Major BPS

72.4

0.56

1.2

63.1

44.4

Major PPT

79.4

0.66

0.9

37.4

Minor 5ss

33.8

-1.8

2.6

44.2

Minor BPS

45.6

-0.4

2.4

56.54

45.1

Associated Gene:

Gene:

NOTCH2

Ensembl Gene ID:

ENSAPLG00000015861

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024024

8987266 - 9054638

67373

ENSAPLT00000016640

8988171 - 9054638

66468