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Intron Name: Anas_platyrhynchos_platyrhynchos_8_9051831_9052327_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9051831 - 9052327

Intron Length:

497

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTAATGTGG

5'SS Class:

major

3'SS Sequence:

GGTTTCCCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTCAT

U12 Branch Point Sequence:

TGTTTGTTAACG

Flanking Amino Acid:

QADVNAVDDHGKSALHWAAA

Intron Amino Acid Position:

1901

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.2

0.43

1.1

54.5

Major BPS

83.4

0.83

0.8

83.7

25.7

Major PPT

77.5

0.62

0.9

70.4

36.3

Minor 5ss

36.7

-1.5

3.3

47.4

48.1

Minor BPS

62.2

0.25

2.1

71.56

41.5

Associated Gene:

Gene:

NOTCH2

Ensembl Gene ID:

ENSAPLG00000015861

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024024

8987266 - 9054638

67373

ENSAPLT00000016640

8988171 - 9054638

66468