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Intron Name: Anas_platyrhynchos_platyrhynchos_8_9062432_9062681_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9062432 - 9062681

Intron Length:

250

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTGGGCACG

5'SS Class:

major

3'SS Sequence:

TGTCCTCCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTGAT

U12 Branch Point Sequence:

ATGTCCCCACCG

Flanking Amino Acid:

AAWVESSAWDGRYAVVVCGD

Intron Amino Acid Position:

146

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

65.4

0.36

1.1

53.6

45.1

Major BPS

76.2

0.65

1.1

65.3

43.7

Major PPT

74.7

0.56

0.8

35.9

Minor 5ss

33.3

-1.9

3.1

45.2

Minor BPS

-0.5

2.1

54.89

45.9

Associated Gene:

Gene:

HMGCS2

Ensembl Gene ID:

ENSAPLG00000016193

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025332

9061466 - 9068518

7053

ENSAPLT00000016900

9058935 - 9068159

9225