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Intron Name: Anas_platyrhynchos_platyrhynchos_8_9062808_9063021_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9062808 - 9063021

Intron Length:

214

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTCGGTGCT

5'SS Class:

major

3'SS Sequence:

TGTGCCCCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTGAC

U12 Branch Point Sequence:

GGGACCCTGACA

Flanking Amino Acid:

GPNAPLVLERGLRGTHMEHA

Intron Amino Acid Position:

188

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.7

0.51

1.3

71.9

36.2

Major BPS

56.5

0.16

1.1

48.6

36.6

Major PPT

0.43

0.9

58.8

38.3

Minor 5ss

29.3

-2.4

3.3

41.8

44.9

Minor BPS

49.2

-0

1.7

57.97

40.9

Associated Gene:

Gene:

HMGCS2

Ensembl Gene ID:

ENSAPLG00000016193

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025332

9061466 - 9068518

7053

ENSAPLT00000016900

9058935 - 9068159

9225