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Intron Name: Anas_platyrhynchos_platyrhynchos_8_9063187_9063260_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9063187 - 9063260

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTGAGCGCT

5'SS Class:

major

3'SS Sequence:

CTCTGCCTTCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGCTCAC

U12 Branch Point Sequence:

GGAGGCTCACGG

Flanking Amino Acid:

RRKAESQRQQAGIQQPFTLD

Intron Amino Acid Position:

243

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.8

0.61

65.8

40.2

Major BPS

52.1

0.05

1.3

41.8

Major PPT

78.6

0.64

0.8

37.1

Minor 5ss

33.1

-1.9

3.4

39.6

45.9

Minor BPS

32.4

-1.4

2.1

29.56

41.1

Associated Gene:

Gene:

HMGCS2

Ensembl Gene ID:

ENSAPLG00000016193

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016900

9058935 - 9068159

9225