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Intron Name: Anas_platyrhynchos_platyrhynchos_8_9063430_9063541_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9063430 - 9063541

Intron Length:

112

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTGGGTGCA

5'SS Class:

major

3'SS Sequence:

TCTCTCCGTGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCACAG

U12 Branch Point Sequence:

GCTGCCTGCACA

Flanking Amino Acid:

GGLYKGLQPFRGVKLEDTYT

Intron Amino Acid Position:

299

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.1

0.52

1.1

62.4

38.2

Major BPS

45.5

-0.2

1.5

54.7

43.1

Major PPT

0.63

0.9

31.8

Minor 5ss

26.6

-2.7

3.2

32.2

42.4

Minor BPS

48.4

-0.1

60.68

45.1

Associated Gene:

Gene:

HMGCS2

Ensembl Gene ID:

ENSAPLG00000016193

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025332

9061466 - 9068518

7053

ENSAPLT00000016900

9058935 - 9068159

9225