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Intron Name: Anas_platyrhynchos_platyrhynchos_8_9063713_9064009_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9063713 - 9064009

Intron Length:

297

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACA|GTGAGTCCC

5'SS Class:

major

3'SS Sequence:

ATTCCCCCCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCAAAT

U12 Branch Point Sequence:

GTGTCCCCAAAT

Flanking Amino Acid:

MYGCLASLLAQCSAQDLAGS

Intron Amino Acid Position:

356

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.1

0.47

59.9

39.3

Major BPS

52.4

0.06

1.1

58.8

34.5

Major PPT

73.2

0.52

0.8

65.9

29.5

Minor 5ss

32.2

-2

2.9

42.7

37.7

Minor BPS

49.5

0.04

71.68

44.3

Associated Gene:

Gene:

HMGCS2

Ensembl Gene ID:

ENSAPLG00000016193

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025332

9061466 - 9068518

7053

ENSAPLT00000016900

9058935 - 9068159

9225