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Intron Name: Anas_platyrhynchos_platyrhynchos_8_9064117_9064227_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

9064117 - 9064227

Intron Length:

111

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTGAGCCCC

5'SS Class:

major

3'SS Sequence:

AACCCATGGCCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTAGGAA

U12 Branch Point Sequence:

CTAACCCTAACC

Flanking Amino Acid:

SLRVSQDASPGSPLDKLLSS

Intron Amino Acid Position:

392

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.2

0.55

1.1

56.7

42.7

Major BPS

50.5

0.01

1.4

51.7

43.9

Major PPT

51.4

0.03

1.1

43.2

41.6

Minor 5ss

33.3

-1.9

35.1

Minor BPS

59.7

0.28

1.8

69.11

41.8

Associated Gene:

Gene:

HMGCS2

Ensembl Gene ID:

ENSAPLG00000016193

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025332

9061466 - 9068518

7053

ENSAPLT00000016900

9058935 - 9068159

9225