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Intron Name: Anas_platyrhynchos_platyrhynchos_8_9064533_9068020_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

9064533 - 9068020

Intron Length:

3488

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GAA|GCCCCTTTA

5'SS Class:

weak_major

3'SS Sequence:

GAGCCCATCGCAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

AGCCCAT

U12 Branch Point Sequence:

GCACGATGAGCC

Flanking Amino Acid:

DDKYRRQYARNPGGGDGSRA

Intron Amino Acid Position:

466

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.07

1.3

53.7

43.2

Major BPS

49.3

-0

1.3

58.2

40.4

Major PPT

59.5

0.21

51.1

37.6

Minor 5ss

35.1

-1.7

4.1

45.2

Minor BPS

36.1

-1

40.01

38.4

Associated Gene:

Gene:

HMGCS2

Ensembl Gene ID:

ENSAPLG00000016193

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016900

9058935 - 9068159

9225