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Intron Name: Anas_platyrhynchos_platyrhynchos_8_9064533_9068295_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

9064533 - 9068295

Intron Length:

3763

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GAA|GCCCCTTTA

5'SS Class:

weak_major

3'SS Sequence:

ACGGGGCCGCGAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CCGTCAC

U12 Branch Point Sequence:

GTCCCCGTCACG

Flanking Amino Acid:

DDKYRRQYARKPPRCPPGTL

Intron Amino Acid Position:

473

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.07

1.3

53.7

43.2

Major BPS

1.2

54.6

40.8

Major PPT

40.1

-0.5

1.6

37.4

Minor 5ss

35.1

-1.7

4.1

45.2

Minor BPS

44.6

-0.5

2.4

53.23

47.2

Associated Gene:

Gene:

HMGCS2

Ensembl Gene ID:

ENSAPLG00000016193

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025332

9061466 - 9068518

7053