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Intron Name: Anas_platyrhynchos_platyrhynchos_8_9066520_9066652_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9066520 - 9066652

Intron Length:

133

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTGAGTCCC

5'SS Class:

strong_major

3'SS Sequence:

CTCCTCCTCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTCCAT

U12 Branch Point Sequence:

GGGTTTCCATCT

Flanking Amino Acid:

MATGRGLAGVVNGQALSKAF

Intron Amino Acid Position:

468

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.7

0.75

0.9

67.6

37.6

Major BPS

77.3

0.68

1.2

86.7

32.3

Major PPT

77.8

0.62

0.7

72.3

25.8

Minor 5ss

30.2

-2.3

2.8

Minor BPS

40.4

-0.6

1.9

53.9

41.5

Associated Gene:

Gene:

PHGDH

Ensembl Gene ID:

ENSAPLG00000027527

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030376

9065207 - 9069005

3799