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Intron Name: Anas_platyrhynchos_platyrhynchos_8_9085210_9087713_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

9085210 - 9087713

Intron Length:

2504

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

TTG|GCGTTGCCT

5'SS Class:

weak_major

3'SS Sequence:

TTTGCACTCACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CAGTAAT

U12 Branch Point Sequence:

TGTCTTTGCACT

Flanking Amino Acid:

ANRNCSLAAVASPAELEKDL

Intron Amino Acid Position:

475

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

51.6

0.04

1.3

50.5

40.3

Major BPS

64.3

0.36

1.2

65.3

38.6

Major PPT

76.4

0.59

0.9

69.5

35.8

Minor 5ss

23.9

-3

36.1

42.8

Minor BPS

48.2

-0

1.9

70.54

40.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016209

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016932

9080420 - 9089971

9552