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Intron Name: Anas_platyrhynchos_platyrhynchos_8_9089143_9089796_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9089143 - 9089796

Intron Length:

654

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGCGAG

5'SS Class:

strong_major

3'SS Sequence:

CTTGGCCGCTTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTCTAAC

U12 Branch Point Sequence:

GCCTGTCTAACC

Flanking Amino Acid:

SLVKFHTHPDSAARDRTLQV

Intron Amino Acid Position:

625

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.1

0.9

72.3

39.5

Major BPS

66.8

0.42

1.2

69.6

35.5

Major PPT

61.2

0.25

58.3

38.4

Minor 5ss

35.7

-1.6

3.3

45.9

49.3

Minor BPS

46.3

-0.3

2.1

55.02

43.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016209

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016932

9080420 - 9089971

9552