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Intron Name: Anas_platyrhynchos_platyrhynchos_8_9098337_9098393_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

9098337 - 9098393

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGATGGT

5'SS Class:

major

3'SS Sequence:

CCTTGCTGAGGAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGCTGAG

U12 Branch Point Sequence:

AGACCGAGAAAC

Flanking Amino Acid:

SPPPSKTSVQRGQSQAPRRT

Intron Amino Acid Position:

243

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.1

0.52

65.5

40.5

Major BPS

52.2

0.06

1.6

51.1

46.3

Major PPT

47.6

-0.1

1.7

54.2

40.2

Minor 5ss

26.9

-2.6

3.5

40.1

Minor BPS

36.7

-1

2.1

44.02

35.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030221

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048324

9093891 - 9098582

4692