Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_8_9103345_9103904_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9103345 - 9103904

Intron Length:

560

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAACTCGC

5'SS Class:

major

3'SS Sequence:

CTGCTCTCTCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTTAC

U12 Branch Point Sequence:

AGACTCTTACCT

Flanking Amino Acid:

DGQWVHDPSEPVVTSQMGTI

Intron Amino Acid Position:

142

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.5

0.7

1.2

67.1

44.6

Major BPS

69.2

0.48

37.1

Major PPT

78.1

0.63

0.8

69.4

36.9

Minor 5ss

40.1

-1.1

2.9

53.8

43.2

Minor BPS

55.7

0.26

1.6

69.4

Associated Gene:

Gene:

PRKAB2

Ensembl Gene ID:

ENSAPLG00000016261

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016975

9101100 - 9105218

4119