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Intron Name: Anas_platyrhynchos_platyrhynchos_8_9113188_9113345_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9113188 - 9113345

Intron Length:

158

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCAGC

5'SS Class:

strong_major

3'SS Sequence:

CCTGTTCGCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTCAG

U12 Branch Point Sequence:

CTCTCAGGAGGT

Flanking Amino Acid:

AVEISQKAKQVFLSTRRGAW

Intron Amino Acid Position:

210

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.8

0.82

0.9

72.2

39.5

Major BPS

58.6

0.22

1.5

38.9

Major PPT

68.8

0.42

60.8

40.2

Minor 5ss

34.3

-1.8

2.9

44.2

Minor BPS

35.1

-1

2.4

53.41

47.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030988

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020233

9107376 - 9114490

7115

ENSAPLT00000046540

9110848 - 9114490

3643